My only experience with stuffed portobellos was making Shake and Shak shroom burgers which was stuffed,covered with panko and finally fried. But, I do know that mushrooms are cooked through when there is no resistence if you put knife through. Even when cooked through they may be still be releasing water a little. Otherwise, if you want them more cooked, I would microwave quickly to finish off. That should do it.